BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F10LP1|AL425739
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1504 0.0
3x_Contig741 117 3e-26
>3x_Contig1509
Length = 8584
Score = 1504 bits (758), Expect = 0.0
Identities = 773/776 (99%), Gaps = 2/776 (0%)
Strand = Plus / Plus
Query: 57 ggccgggccaaagaaggtttctaagcaagtyaacaagagccgtacc-agaacaggtgccg 115
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 1 ggccgggccaaagaaggtttctaagcaagtcaacaagagccgtacccagaacaggtgccg 60
Query: 116 gtccttctagagttccaaagaaggctgcttctgctgctgccctagtgccagctttgctaa 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccttctagagttccaaagaaggctgcttctgctgctgccctagtgccagctttgctaa 120
Query: 176 gagctcctatttctactagagttaatgtcgagggtttgccaagagacattaaccaagacg 235
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gagctcctatttctactagagttaatgtcgagggtt-gccaagagacattaaccaagacg 179
Query: 236 ctgttaaagtatgtcccattttagccatggcctcttagtaggttcttttctaatgaaaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctgttaaagtatgtcccattttagccatggcctcttagtaggttcttttctaatgaaaag 239
Query: 296 gactgtcgagatgctactgtactgattgcgaaaacaaatcggatcaaactgcaataagac 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gactgtcgagatgctactgtactgattgcgaaaacaaatcggatcaaactgcaataagac 299
Query: 356 ttgcggttaatttaagtttacaacggatatatcctgtggaattccatccttatgtttact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttgcggttaatttaagtttacaacggatatatcctgtggaattccatccttatgtttact 359
Query: 416 atacgatcatacattcccgtgtatttgattaagaagaaacggtcgatcgatacctttttt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atacgatcatacattcccgtgtatttgattaagaagaaacggtcgatcgatacctttttt 419
Query: 476 gaggtctgatattgatgtgtgaataatttatttcagagttagtttttattgagctaatga 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaggtctgatattgatgtgtgaataatttatttcagagttagtttttattgagctaatga 479
Query: 536 aatataacaaaacgaaattagctatccaattggctgggtttcgcttttcagcaagccttc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aatataacaaaacgaaattagctatccaattggctgggtttcgcttttcagcaagccttc 539
Query: 596 ctttgtgatttctttccgtttttctcctctaagttgacagaacttttcatcaaaattatg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctttgtgatttctttccgtttttctcctctaagttgacagaacttttcatcaaaattatg 599
Query: 656 cactgaacttcgtttatttacgacattttatttgatggagaaacggtagtgaatcacgat 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cactgaacttcgtttatttacgacattttatttgatggagaaacggtagtgaatcacgat 659
Query: 716 tgggaaatgccgaaaagatgaagtatatctattttttctcgtcatatcttctattcttgt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgggaaatgccgaaaagatgaagtatatctattttttctcgtcatatcttctattcttgt 719
Query: 776 gacattatgtgtcactggagtttctgttaccatttattacatttggcaatgcatct 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gacattatgtgtcactggagtttctgttaccatttattacatttggcaatgcatct 775
>3x_Contig741
Length = 3021
Score = 117 bits (59), Expect = 3e-26
Identities = 90/97 (92%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 1 gatcaatcattagatgaaattattggctcagccaagcatgccagaagaaacaacaaggcc 60
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 95 gatcaatcattagatgaaattattg-ctcagccaagcatgccagaagattcaacaaggcc 37
Query: 61 gggccaaagaaggtttctaagcaagtyaacaagagcc 97
|||||||||| |||| ||||||||| ||||||||||
Sbjct: 36 -ggccaaagaa-gtttttaagcaagtcaacaagagcc 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6395
Number of Sequences: 1807
Number of extensions: 6395
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)